Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 REXO1L9P-201ENST00000604264 2108 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MIR197-201ENST00000384976 75 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 RN7SL582P-201ENST00000491078 279 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC104117.4-201ENST00000521486 847 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 BMF-206ENST00000558774 671 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 OR7E12P-201ENST00000344740 973 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 U3.41-201ENST00000408711 219 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC138392.1-201ENST00000427577 921 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC005722.1-201ENST00000431878 964 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 IFNWP19-201ENST00000438727 566 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 DUX4L31-201ENST00000446466 1136 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ALG3P1-201ENST00000508806 1114 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 OR5BD1P-201ENST00000532527 817 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC093724.1-201ENST00000448659 1027 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC106820.3-201ENST00000561653 397 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL157823.1-201ENST00000403727 628 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 IGHEP2-201ENST00000519308 1256 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL132994.2-201ENST00000603120 687 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 SRP9-205ENST00000626563 329 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AL158070.2-201ENST00000623713 1621 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AL136309.1-201ENST00000403917 691 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AL451000.1-201ENST00000451300 1186 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC005274.1-201ENST00000623460 802 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms