Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC242376.2-201ENST00000619355 883 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC022188.1-201ENST00000620960 1664 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC105020.1-201ENST00000435356 2205 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 RPL18AP3-201ENST00000462885 528 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 KRT8P21-201ENST00000430398 1491 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 TBC1D3J-201ENST00000620719 1426 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 KLF2P1-201ENST00000447438 1042 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC021723.1-201ENST00000486306 515 ntBASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
ALMS1Q8TCU4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AP000356.3-201ENST00000382243 753 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC010234.1-201ENST00000494599 870 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC090857.1-201ENST00000527400 390 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC005324.6-201ENST00000587972 613 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AL132994.2-201ENST00000603120 687 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 DUX4L47-201ENST00000566374 394 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms