Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 AC107890.1-201ENST00000422478 521 ntBASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TEX28P1-201ENST00000613479 1221 ntBASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TEX28P2-201ENST00000617764 1221 ntBASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 MIR6069-201ENST00000620069 79 ntBASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH19Q8TAB3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC023157.3-201ENST00000619086 2088 ntBASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AL512361.1-201ENST00000554200 418 ntBASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH19Q8TAB3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 SERBP1P3-201ENST00000459980 809 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms