Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AC004987.2-201ENST00000395959 1148 ntBASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AC005237.2-201ENST00000434368 219 ntBASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 YBX1P5-201ENST00000509441 847 ntBASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AC105339.1-204ENST00000636249 355 ntBASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK2A3Q8NEV1 AC099063.4-201ENST00000641099 1602 ntBASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AL139010.1-201ENST00000454878 894 ntBASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AC069335.1-201ENST00000489972 472 ntBASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AL136379.1-201ENST00000623471 2642 ntBASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CSNK2A3Q8NEV1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms