Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 RFPL4AP1-201ENST00000530883 850 ntBASIC13.84□□□□□ -0.19
CPEB3Q8NE35 HNRNPUP1-201ENST00000554987 333 ntBASIC13.84□□□□□ -0.19
CPEB3Q8NE35 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AC097359.3-201ENST00000603982 1210 ntBASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AL158211.3-201ENST00000607385 239 ntBASIC13.84□□□□□ -0.19
CPEB3Q8NE35 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AL033527.5-202ENST00000641632 1098 ntBASIC13.84□□□□□ -0.19
CPEB3Q8NE35 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
CPEB3Q8NE35 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.83□□□□□ -0.2
CPEB3Q8NE35 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 MIR6069-201ENST00000620069 79 ntBASIC13.83□□□□□ -0.2
CPEB3Q8NE35 AL590560.3-201ENST00000623350 461 ntBASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.83□□□□□ -0.2
CPEB3Q8NE35 AC092127.1-201ENST00000567093 3455 ntBASIC13.83□□□□□ -0.2
CPEB3Q8NE35 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AC100757.3-201ENST00000622361 1406 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms