Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AP001005.1-201ENST00000571755 1248 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 ACTL9-202ENST00000612068 1252 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AC026748.1-201ENST00000624349 3251 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AC023908.3-201ENST00000564211 3047 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 SNX18-202ENST00000343017 3140 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 AC091951.1-201ENST00000512854 2465 ntBASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM42Q8IWZ5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AC134407.2-201ENST00000625089 1978 ntBASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AL031284.1-201ENST00000419297 478 ntBASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AC018712.1-201ENST00000455767 687 ntBASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 AL589702.1-201ENST00000641229 1509 ntBASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM42Q8IWZ5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM42Q8IWZ5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 HNRNPDP1-201ENST00000439535 754 ntBASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRIM42Q8IWZ5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM42Q8IWZ5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms