Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTTNQ86VV8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTTNQ86VV8 AL138828.2-201ENST00000615812 383 ntBASIC14.02□□□□□ -0.16
RTTNQ86VV8 PPT1-215ENST00000641471 2368 ntBASIC14.02□□□□□ -0.16
RTTNQ86VV8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTTNQ86VV8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTTNQ86VV8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RTTNQ86VV8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 AL596257.1-201ENST00000641463 2694 ntBASIC14.02□□□□□ -0.17
RTTNQ86VV8 AC073347.1-201ENST00000421633 2643 ntBASIC14.02□□□□□ -0.17
RTTNQ86VV8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 BNIP3P1-202ENST00000550043 1585 ntBASIC14.02□□□□□ -0.17
RTTNQ86VV8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 IGHV3-72-202ENST00000621503 303 ntBASIC14.02□□□□□ -0.17
RTTNQ86VV8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTTNQ86VV8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
RTTNQ86VV8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 PIN1P1-201ENST00000412108 996 ntBASIC14.01□□□□□ -0.17
RTTNQ86VV8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 COX5BP8-201ENST00000416911 349 ntBASIC14.01□□□□□ -0.17
RTTNQ86VV8 RBPMS2P1-201ENST00000437762 623 ntBASIC14.01□□□□□ -0.17
RTTNQ86VV8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 SPDYE22P-201ENST00000582158 798 ntBASIC14.01□□□□□ -0.17
RTTNQ86VV8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.01□□□□□ -0.17
RTTNQ86VV8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTTNQ86VV8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 GPR53P-205ENST00000457298 1084 ntBASIC14□□□□□ -0.17
RTTNQ86VV8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14□□□□□ -0.17
RTTNQ86VV8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14□□□□□ -0.17
RTTNQ86VV8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14□□□□□ -0.17
RTTNQ86VV8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms