Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CDC14C-201ENST00000428251 1719 ntBASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AL122018.1-201ENST00000446607 2310 ntBASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AC026120.1-201ENST00000611536 926 ntBASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.47□□□□□ -0.09
HDDC2Q7Z4H3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 MIR574-201ENST00000385209 96 ntBASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AC027307.2-201ENST00000591252 911 ntBASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 AC092902.6-201ENST00000641783 218 ntBASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDDC2Q7Z4H3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms