Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD2Q7Z408 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13□□□□□ -0.33
CSMD2Q7Z408 RNMTL1P1-201ENST00000454103 560 ntBASIC13□□□□□ -0.33
CSMD2Q7Z408 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13□□□□□ -0.33
CSMD2Q7Z408 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CSMD2Q7Z408 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 TMCO5B-205ENST00000530020 894 ntBASIC13□□□□□ -0.33
CSMD2Q7Z408 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13□□□□□ -0.33
CSMD2Q7Z408 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 NDUFS6P1-201ENST00000485187 316 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SCARNA21-201ENST00000517026 139 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SAMD11P1-201ENST00000571429 661 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AC097359.3-201ENST00000603982 1210 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 MIR5196-201ENST00000578146 115 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AC068587.8-201ENST00000641239 219 ntBASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD2Q7Z408 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AP002803.1-201ENST00000528836 498 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 ZACNP1-201ENST00000612259 710 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AP001002.3-201ENST00000623482 206 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AC106886.4-201ENST00000623557 2502 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AC074138.1-201ENST00000611182 1303 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 ACTBP8-201ENST00000403258 1108 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AC104073.2-201ENST00000453737 312 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AC100850.1-201ENST00000506768 649 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 RBM8B-201ENST00000555532 525 ntBASIC12.98□□□□□ -0.33
CSMD2Q7Z408 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms