Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AC009407.1-201ENST00000568958 598 ntBASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 CICP13-201ENST00000422015 2789 ntBASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC022144.1-201ENST00000602255 1580 ntBASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AC008738.7-201ENST00000609744 511 ntBASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD3Q7Z3D4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AC074338.1-201ENST00000416825 156 ntBASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms