Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AC011477.6-201ENST00000604980 1927 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 PPT1-215ENST00000641471 2368 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AC055876.2-201ENST00000531834 546 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 TPRX2P-201ENST00000535362 881 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 TP53TG3HP-202ENST00000569755 579 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AC025048.6-201ENST00000634326 1161 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 AC099063.4-201ENST00000641099 1602 ntBASIC16.8■□□□□ 0.28
VSTM1Q6UX27 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSTM1Q6UX27 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 CDC14C-201ENST00000428251 1719 ntBASIC16.79■□□□□ 0.28
VSTM1Q6UX27 SLC7A15P-201ENST00000424028 1363 ntBASIC16.79■□□□□ 0.28
VSTM1Q6UX27 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 MEIS3P1-201ENST00000495167 958 ntBASIC16.79■□□□□ 0.28
VSTM1Q6UX27 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC140912.1-201ENST00000577171 1054 ntBASIC16.79■□□□□ 0.28
VSTM1Q6UX27 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 AC099568.2-201ENST00000609194 695 ntBASIC16.79■□□□□ 0.28
VSTM1Q6UX27 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VSTM1Q6UX27 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 LINC02447-202ENST00000501888 2146 ntBASIC16.78■□□□□ 0.28
VSTM1Q6UX27 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSTM1Q6UX27 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms