Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.86□□□□□ -0.19
TFF3Q07654 CLUHP6-201ENST00000580789 941 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 HLA-A-202ENST00000376806 1854 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TFF3Q07654 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AL662844.4-201ENST00000606367 2838 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TFF3Q07654 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.85□□□□□ -0.19
TFF3Q07654 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.85□□□□□ -0.19
TFF3Q07654 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.85□□□□□ -0.19
TFF3Q07654 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.85□□□□□ -0.19
TFF3Q07654 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.85□□□□□ -0.19
TFF3Q07654 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TFF3Q07654 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.85□□□□□ -0.19
TFF3Q07654 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TFF3Q07654 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TFF3Q07654 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.85□□□□□ -0.19
TFF3Q07654 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 AL391005.1-201ENST00000623953 2435 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 AL355864.2-201ENST00000447420 863 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 AC007551.1-201ENST00000457394 519 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms