Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 KRT8P44-201ENST00000441609 1350 ntBASIC17.77■□□□□ 0.43
TPM4P67936 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TPM4P67936 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.77■□□□□ 0.43
TPM4P67936 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.77■□□□□ 0.43
TPM4P67936 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM4P67936 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 AGAP7P-201ENST00000582299 2062 ntBASIC17.76■□□□□ 0.43
TPM4P67936 AGAP14-201ENST00000624701 2060 ntBASIC17.76■□□□□ 0.43
TPM4P67936 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM4P67936 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 AC091951.1-201ENST00000512854 2465 ntBASIC17.76■□□□□ 0.43
TPM4P67936 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TPM4P67936 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
TPM4P67936 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TPM4P67936 MROH4P-201ENST00000431302 1578 ntBASIC17.76■□□□□ 0.43
TPM4P67936 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
TPM4P67936 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 UPK3BP1-201ENST00000428678 509 ntBASIC17.76■□□□□ 0.43
TPM4P67936 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM4P67936 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 KRT18P35-201ENST00000510488 1269 ntBASIC17.76■□□□□ 0.43
TPM4P67936 PRYP6-201ENST00000514804 343 ntBASIC17.76■□□□□ 0.43
TPM4P67936 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.76■□□□□ 0.43
TPM4P67936 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.76■□□□□ 0.43
TPM4P67936 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TPM4P67936 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
TPM4P67936 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM4P67936 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 CICP23-201ENST00000605013 2741 ntBASIC17.76■□□□□ 0.43
TPM4P67936 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM4P67936 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM4P67936 AC013726.1-201ENST00000563747 2285 ntBASIC17.75■□□□□ 0.43
TPM4P67936 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.75■□□□□ 0.43
TPM4P67936 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 AC092474.2-201ENST00000424288 719 ntBASIC17.75■□□□□ 0.43
TPM4P67936 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.75■□□□□ 0.43
TPM4P67936 AF186996.4-201ENST00000467186 377 ntBASIC17.75■□□□□ 0.43
TPM4P67936 AC108751.1-201ENST00000490852 363 ntBASIC17.75■□□□□ 0.43
TPM4P67936 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.75■□□□□ 0.43
TPM4P67936 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.75■□□□□ 0.43
TPM4P67936 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.75■□□□□ 0.43
TPM4P67936 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TPM4P67936 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM4P67936 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM4P67936 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM4P67936 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM4P67936 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms