Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 AL512638.1-201ENST00000457493 794 ntBASIC14.27□□□□□ -0.13
RPS4XP62701 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.27□□□□□ -0.13
RPS4XP62701 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.27□□□□□ -0.13
RPS4XP62701 ALG1L8P-201ENST00000533887 760 ntBASIC14.27□□□□□ -0.13
RPS4XP62701 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.27□□□□□ -0.13
RPS4XP62701 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
RPS4XP62701 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
RPS4XP62701 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 KRT8P44-201ENST00000441609 1350 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 FO538757.1-201ENST00000623083 1397 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 TNRC18P2-201ENST00000417666 2714 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RPS4XP62701 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RPS4XP62701 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 AC069120.2-201ENST00000524091 540 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.26□□□□□ -0.13
RPS4XP62701 AL158211.3-201ENST00000607385 239 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 AL390754.1-201ENST00000619088 582 ntBASIC14.26□□□□□ -0.13
RPS4XP62701 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPS4XP62701 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPS4XP62701 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
RPS4XP62701 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RPS4XP62701 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 AZGP1P1-201ENST00000411909 902 ntBASIC14.25□□□□□ -0.13
RPS4XP62701 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 TSPY16P-201ENST00000449843 468 ntBASIC14.25□□□□□ -0.13
RPS4XP62701 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 AC105021.1-202ENST00000570572 669 ntBASIC14.25□□□□□ -0.13
RPS4XP62701 AC018529.1-201ENST00000613063 361 ntBASIC14.25□□□□□ -0.13
RPS4XP62701 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms