Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.43□□□□□ -0.1
CXCR4P61073 GPX1P2-201ENST00000429271 606 ntBASIC14.43□□□□□ -0.1
CXCR4P61073 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 CXCL1P1-201ENST00000502804 216 ntBASIC14.43□□□□□ -0.1
CXCR4P61073 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.43□□□□□ -0.1
CXCR4P61073 AC012640.2-201ENST00000561606 901 ntBASIC14.43□□□□□ -0.1
CXCR4P61073 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 MYO15B-237ENST00000642007 4893 ntBASIC14.43□□□□□ -0.1
CXCR4P61073 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCR4P61073 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CXCR4P61073 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCR4P61073 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CXCR4P61073 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 OR2I1P-209ENST00000641730 5365 ntBASIC14.42□□□□□ -0.1
CXCR4P61073 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 MIR1224-201ENST00000408193 85 ntBASIC14.42□□□□□ -0.1
CXCR4P61073 HNRNPDP1-201ENST00000439535 754 ntBASIC14.42□□□□□ -0.1
CXCR4P61073 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 AC012313.10-201ENST00000623509 926 ntBASIC14.42□□□□□ -0.1
CXCR4P61073 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCR4P61073 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCR4P61073 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCR4P61073 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms