Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.88□□□□□ -0.03
SMSP52788 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.88□□□□□ -0.03
SMSP52788 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.88□□□□□ -0.03
SMSP52788 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.88□□□□□ -0.03
SMSP52788 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.88□□□□□ -0.03
SMSP52788 CR383656.12-201ENST00000549567 513 ntBASIC14.88□□□□□ -0.03
SMSP52788 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.88□□□□□ -0.03
SMSP52788 AP000842.3-202ENST00000569238 1080 ntBASIC14.88□□□□□ -0.03
SMSP52788 MIR3909-201ENST00000579518 119 ntBASIC14.88□□□□□ -0.03
SMSP52788 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.88□□□□□ -0.03
SMSP52788 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.88□□□□□ -0.03
SMSP52788 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.88□□□□□ -0.03
SMSP52788 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMSP52788 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.88□□□□□ -0.03
SMSP52788 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SMSP52788 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMSP52788 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 MIR600HG-201ENST00000449175 5984 ntBASIC14.87□□□□□ -0.03
SMSP52788 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SMSP52788 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.87□□□□□ -0.03
SMSP52788 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 MIR661-201ENST00000384842 89 ntBASIC14.87□□□□□ -0.03
SMSP52788 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 PIN1P1-201ENST00000412108 996 ntBASIC14.87□□□□□ -0.03
SMSP52788 CRB3P1-201ENST00000449338 276 ntBASIC14.87□□□□□ -0.03
SMSP52788 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.87□□□□□ -0.03
SMSP52788 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.87□□□□□ -0.03
SMSP52788 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SMSP52788 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMSP52788 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SMSP52788 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.87□□□□□ -0.03
SMSP52788 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.87□□□□□ -0.03
SMSP52788 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMSP52788 PPT1-215ENST00000641471 2368 ntBASIC14.87□□□□□ -0.03
SMSP52788 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.87□□□□□ -0.03
SMSP52788 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.86□□□□□ -0.03
SMSP52788 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.86□□□□□ -0.03
SMSP52788 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 RNU1-129P-201ENST00000384064 167 ntBASIC14.86□□□□□ -0.03
SMSP52788 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.86□□□□□ -0.03
SMSP52788 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.86□□□□□ -0.03
SMSP52788 U1.21-201ENST00000580816 167 ntBASIC14.86□□□□□ -0.03
SMSP52788 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.86□□□□□ -0.03
SMSP52788 AC004233.3-201ENST00000607794 1269 ntBASIC14.86□□□□□ -0.03
SMSP52788 AC073592.8-201ENST00000624126 511 ntBASIC14.86□□□□□ -0.03
SMSP52788 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.86□□□□□ -0.03
SMSP52788 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.86□□□□□ -0.03
SMSP52788 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMSP52788 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms