Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.67■□□□□ 0.58
TNNI2P48788 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 PCDH8P1-201ENST00000428983 2773 ntBASIC18.67■□□□□ 0.58
TNNI2P48788 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TNNI2P48788 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 BCYRN1-201ENST00000418539 200 ntBASIC18.66■□□□□ 0.58
TNNI2P48788 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TNNI2P48788 DUX4L45-201ENST00000566406 1057 ntBASIC18.66■□□□□ 0.58
TNNI2P48788 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.66■□□□□ 0.58
TNNI2P48788 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.66■□□□□ 0.58
TNNI2P48788 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNI2P48788 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 DRD5P1-201ENST00000456605 1438 ntBASIC18.66■□□□□ 0.58
TNNI2P48788 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNNI2P48788 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNI2P48788 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TNNI2P48788 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 AC026954.1-201ENST00000429771 1293 ntBASIC18.65■□□□□ 0.58
TNNI2P48788 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.65■□□□□ 0.58
TNNI2P48788 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.65■□□□□ 0.58
TNNI2P48788 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 AC023310.1-201ENST00000554836 735 ntBASIC18.65■□□□□ 0.58
TNNI2P48788 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.65■□□□□ 0.58
TNNI2P48788 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 AC008687.7-202ENST00000637404 953 ntBASIC18.65■□□□□ 0.58
TNNI2P48788 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNI2P48788 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNI2P48788 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNI2P48788 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNI2P48788 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNI2P48788 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.64■□□□□ 0.58
TNNI2P48788 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms