Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.93■□□□□ 0.14
CHRNA4P43681 IGHV3-42-201ENST00000520410 361 ntBASIC15.93■□□□□ 0.14
CHRNA4P43681 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA4P43681 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA4P43681 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 AL844908.2-201ENST00000609461 460 ntBASIC15.93■□□□□ 0.14
CHRNA4P43681 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA4P43681 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CHRNA4P43681 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA4P43681 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
CHRNA4P43681 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA4P43681 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 AC100757.3-201ENST00000622361 1406 ntBASIC15.93■□□□□ 0.14
CHRNA4P43681 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA4P43681 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CHRNA4P43681 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRNA4P43681 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 RN7SL618P-201ENST00000477850 296 ntBASIC15.92■□□□□ 0.14
CHRNA4P43681 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.92■□□□□ 0.14
CHRNA4P43681 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AL390955.2-201ENST00000603032 514 ntBASIC15.92■□□□□ 0.14
CHRNA4P43681 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.92■□□□□ 0.14
CHRNA4P43681 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 AL390754.1-201ENST00000619088 582 ntBASIC15.92■□□□□ 0.14
CHRNA4P43681 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.92■□□□□ 0.14
CHRNA4P43681 AL590560.3-201ENST00000623350 461 ntBASIC15.92■□□□□ 0.14
CHRNA4P43681 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHRNA4P43681 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
CHRNA4P43681 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA4P43681 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA4P43681 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA4P43681 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CHRNA4P43681 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA4P43681 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.91■□□□□ 0.14
CHRNA4P43681 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 PMS2P2-201ENST00000425039 1128 ntBASIC15.91■□□□□ 0.14
CHRNA4P43681 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.91■□□□□ 0.14
CHRNA4P43681 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRNA4P43681 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AL109936.8-201ENST00000641772 604 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms