Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ABCD3P28288 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.56□□□□□ -0.08
ABCD3P28288 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
ABCD3P28288 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.56□□□□□ -0.08
ABCD3P28288 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.56□□□□□ -0.08
ABCD3P28288 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 SLED1-202ENST00000512051 380 ntBASIC14.56□□□□□ -0.08
ABCD3P28288 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.56□□□□□ -0.08
ABCD3P28288 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 TIMM17BP1-201ENST00000545713 516 ntBASIC14.56□□□□□ -0.08
ABCD3P28288 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ABCD3P28288 AC092337.1-201ENST00000568699 1129 ntBASIC14.56□□□□□ -0.08
ABCD3P28288 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.56□□□□□ -0.08
ABCD3P28288 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ABCD3P28288 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 PAUPAR-201ENST00000630360 2965 ntBASIC14.56□□□□□ -0.08
ABCD3P28288 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCD3P28288 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.56□□□□□ -0.08
ABCD3P28288 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ABCD3P28288 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ABCD3P28288 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 MIR661-201ENST00000384842 89 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 AC002472.2-201ENST00000442739 958 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 SERBP1P5-201ENST00000510079 1181 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.55□□□□□ -0.08
ABCD3P28288 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 RN7SL204P-201ENST00000582831 262 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 AC092364.2-202ENST00000597012 1073 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 SRD5A3P1-201ENST00000603021 949 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCD3P28288 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ABCD3P28288 AF228730.6-201ENST00000641497 218 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 AC084121.3-201ENST00000641716 218 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 CICP13-201ENST00000422015 2789 ntBASIC14.55□□□□□ -0.08
ABCD3P28288 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms