Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.59□□□□□ -0.23
CD40P25942 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 KRT18P43-201ENST00000469825 1281 ntBASIC13.59□□□□□ -0.23
CD40P25942 RPL13AP25-201ENST00000484130 612 ntBASIC13.59□□□□□ -0.23
CD40P25942 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.59□□□□□ -0.23
CD40P25942 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.59□□□□□ -0.23
CD40P25942 MIR4313-201ENST00000580760 101 ntBASIC13.59□□□□□ -0.23
CD40P25942 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.59□□□□□ -0.23
CD40P25942 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 AC018695.7-201ENST00000624587 2492 ntBASIC13.58□□□□□ -0.23
CD40P25942 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CD40P25942 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.58□□□□□ -0.23
CD40P25942 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.58□□□□□ -0.23
CD40P25942 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CD40P25942 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD40P25942 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD40P25942 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD40P25942 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CD40P25942 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CD40P25942 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CD40P25942 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.58□□□□□ -0.24
CD40P25942 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.58□□□□□ -0.24
CD40P25942 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.58□□□□□ -0.24
CD40P25942 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.58□□□□□ -0.24
CD40P25942 BRI3BPP1-201ENST00000594224 787 ntBASIC13.58□□□□□ -0.24
CD40P25942 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CD40P25942 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.58□□□□□ -0.24
CD40P25942 AC133539.2-201ENST00000604757 467 ntBASIC13.58□□□□□ -0.24
CD40P25942 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 AL121723.1-201ENST00000445194 1519 ntBASIC13.58□□□□□ -0.24
CD40P25942 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.58□□□□□ -0.24
CD40P25942 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD40P25942 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD40P25942 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.57□□□□□ -0.24
CD40P25942 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
CD40P25942 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.57□□□□□ -0.24
CD40P25942 AC244107.1-201ENST00000442033 332 ntBASIC13.57□□□□□ -0.24
CD40P25942 TTTY23B-201ENST00000442790 549 ntBASIC13.57□□□□□ -0.24
CD40P25942 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.57□□□□□ -0.24
CD40P25942 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.57□□□□□ -0.24
CD40P25942 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.57□□□□□ -0.24
CD40P25942 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.57□□□□□ -0.24
CD40P25942 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms