Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATP4AP20648 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 ARSEP1-201ENST00000420443 635 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 AC112492.5-201ENST00000421897 457 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 VDAC1P7-201ENST00000462417 847 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 KRT18P43-201ENST00000469825 1281 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 HILS1-202ENST00000545329 423 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP4AP20648 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.46■□□□□ 0.39
ATP4AP20648 AC010319.3-201ENST00000597028 470 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 AL049840.4-201ENST00000602422 811 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 AC133539.2-201ENST00000604757 467 ntBASIC17.46■□□□□ 0.39
ATP4AP20648 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP4AP20648 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP4AP20648 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ATP4AP20648 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP4AP20648 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP4AP20648 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP4AP20648 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP4AP20648 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP4AP20648 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP4AP20648 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP4AP20648 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 AC008735.3-201ENST00000596646 500 ntBASIC17.45■□□□□ 0.38
ATP4AP20648 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 AL162274.1-201ENST00000617191 1098 ntBASIC17.45■□□□□ 0.38
ATP4AP20648 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP4AP20648 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 KRT8P22-201ENST00000562317 1415 ntBASIC17.45■□□□□ 0.38
ATP4AP20648 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP4AP20648 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP4AP20648 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP4AP20648 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP4AP20648 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
ATP4AP20648 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 AC134915.1-201ENST00000426461 574 ntBASIC17.44■□□□□ 0.38
ATP4AP20648 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP4AP20648 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 AC007389.4-201ENST00000454674 793 ntBASIC17.44■□□□□ 0.38
ATP4AP20648 AC106886.1-201ENST00000568660 600 ntBASIC17.44■□□□□ 0.38
ATP4AP20648 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP4AP20648 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP4AP20648 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP4AP20648 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ATP4AP20648 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP4AP20648 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
ATP4AP20648 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP4AP20648 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms