Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN2P17655 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN2P17655 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN2P17655 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN2P17655 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.25■□□□□ 0.51
CAPN2P17655 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN2P17655 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN2P17655 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN2P17655 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN2P17655 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN2P17655 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CAPN2P17655 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CAPN2P17655 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CAPN2P17655 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN2P17655 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN2P17655 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN2P17655 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN2P17655 AC093525.8-201ENST00000624099 1342 ntBASIC18.24■□□□□ 0.51
CAPN2P17655 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CAPN2P17655 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.24■□□□□ 0.51
CAPN2P17655 PDIA3P1-201ENST00000471856 1510 ntBASIC18.24■□□□□ 0.51
CAPN2P17655 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN2P17655 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN2P17655 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN2P17655 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.24■□□□□ 0.51
CAPN2P17655 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN2P17655 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN2P17655 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN2P17655 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN2P17655 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CAPN2P17655 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CAPN2P17655 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 AL513523.2-202ENST00000427283 2040 ntBASIC18.23■□□□□ 0.51
CAPN2P17655 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CAPN2P17655 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN2P17655 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN2P17655 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN2P17655 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CAPN2P17655 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN2P17655 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN2P17655 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN2P17655 RPL7P3-201ENST00000441388 714 ntBASIC18.23■□□□□ 0.51
CAPN2P17655 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN2P17655 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN2P17655 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN2P17655 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.23■□□□□ 0.51
CAPN2P17655 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN2P17655 AP000812.2-201ENST00000538934 718 ntBASIC18.23■□□□□ 0.51
CAPN2P17655 ENPP7P5-201ENST00000541031 1031 ntBASIC18.23■□□□□ 0.51
CAPN2P17655 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN2P17655 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN2P17655 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms