Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCG2P13521 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SCG2P13521 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.13■□□□□ 0.49
SCG2P13521 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCG2P13521 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCG2P13521 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCG2P13521 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 MEIS3P1-201ENST00000495167 958 ntBASIC18.12■□□□□ 0.49
SCG2P13521 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.12■□□□□ 0.49
SCG2P13521 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SCG2P13521 AC009118.2-201ENST00000613275 655 ntBASIC18.12■□□□□ 0.49
SCG2P13521 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.12■□□□□ 0.49
SCG2P13521 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SCG2P13521 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.12■□□□□ 0.49
SCG2P13521 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.12■□□□□ 0.49
SCG2P13521 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCG2P13521 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.12■□□□□ 0.49
SCG2P13521 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.12■□□□□ 0.49
SCG2P13521 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.11■□□□□ 0.49
SCG2P13521 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
SCG2P13521 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 SPTLC1P1-201ENST00000447199 261 ntBASIC18.11■□□□□ 0.49
SCG2P13521 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 DOC2GP-202ENST00000514950 1163 ntBASIC18.11■□□□□ 0.49
SCG2P13521 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.11■□□□□ 0.49
SCG2P13521 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.11■□□□□ 0.49
SCG2P13521 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.11■□□□□ 0.49
SCG2P13521 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.11■□□□□ 0.49
SCG2P13521 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SCG2P13521 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 AC138969.3-201ENST00000546612 1459 ntBASIC18.11■□□□□ 0.49
SCG2P13521 AC138932.2-201ENST00000548268 1459 ntBASIC18.11■□□□□ 0.49
SCG2P13521 AC126755.4-201ENST00000549796 1459 ntBASIC18.11■□□□□ 0.49
SCG2P13521 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
SCG2P13521 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG2P13521 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.11■□□□□ 0.49
SCG2P13521 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.11■□□□□ 0.49
SCG2P13521 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SCG2P13521 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG2P13521 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
SCG2P13521 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG2P13521 AC005034.1-201ENST00000426657 489 ntBASIC18.1■□□□□ 0.49
SCG2P13521 GNAQP1-201ENST00000444815 1067 ntBASIC18.1■□□□□ 0.49
SCG2P13521 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG2P13521 AL391069.4-201ENST00000609583 481 ntBASIC18.1■□□□□ 0.49
SCG2P13521 AL158212.4-201ENST00000624062 1286 ntBASIC18.1■□□□□ 0.49
SCG2P13521 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
SCG2P13521 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG2P13521 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms