Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.31■□□□□ 0.36
CLTAP09496 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLTAP09496 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CLTAP09496 AC074044.1-201ENST00000609673 707 ntBASIC17.31■□□□□ 0.36
CLTAP09496 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLTAP09496 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.31■□□□□ 0.36
CLTAP09496 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLTAP09496 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.3■□□□□ 0.36
CLTAP09496 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLTAP09496 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 Z97205.2-201ENST00000564697 1639 ntBASIC17.3■□□□□ 0.36
CLTAP09496 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.3■□□□□ 0.36
CLTAP09496 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.3■□□□□ 0.36
CLTAP09496 SPTLC1P1-201ENST00000447199 261 ntBASIC17.3■□□□□ 0.36
CLTAP09496 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.3■□□□□ 0.36
CLTAP09496 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.3■□□□□ 0.36
CLTAP09496 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.3■□□□□ 0.36
CLTAP09496 AC138761.1-201ENST00000584393 385 ntBASIC17.3■□□□□ 0.36
CLTAP09496 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLTAP09496 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.3■□□□□ 0.36
CLTAP09496 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.3■□□□□ 0.36
CLTAP09496 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.3■□□□□ 0.36
CLTAP09496 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.3■□□□□ 0.36
CLTAP09496 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.3■□□□□ 0.36
CLTAP09496 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.3■□□□□ 0.36
CLTAP09496 AC004461.2-201ENST00000629517 803 ntBASIC17.3■□□□□ 0.36
CLTAP09496 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.3■□□□□ 0.36
CLTAP09496 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLTAP09496 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLTAP09496 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.3■□□□□ 0.36
CLTAP09496 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms