Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.59■□□□□ 0.25
APOEP02649 AC022144.1-201ENST00000602255 1580 ntBASIC16.59■□□□□ 0.25
APOEP02649 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
APOEP02649 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
APOEP02649 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 NORAD-201ENST00000565493 5339 ntBASIC16.59■□□□□ 0.25
APOEP02649 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOEP02649 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
APOEP02649 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.58■□□□□ 0.25
APOEP02649 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APOEP02649 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
APOEP02649 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
APOEP02649 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APOEP02649 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
APOEP02649 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.58■□□□□ 0.24
APOEP02649 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.58■□□□□ 0.24
APOEP02649 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.58■□□□□ 0.24
APOEP02649 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.58■□□□□ 0.24
APOEP02649 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 AC010336.2-201ENST00000564226 506 ntBASIC16.58■□□□□ 0.24
APOEP02649 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.58■□□□□ 0.24
APOEP02649 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
APOEP02649 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
APOEP02649 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOEP02649 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
APOEP02649 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 REXO1L1P-202ENST00000608646 1974 ntBASIC16.57■□□□□ 0.24
APOEP02649 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 AC011477.6-201ENST00000604980 1927 ntBASIC16.57■□□□□ 0.24
APOEP02649 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.57■□□□□ 0.24
APOEP02649 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.57■□□□□ 0.24
APOEP02649 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.57■□□□□ 0.24
APOEP02649 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.57■□□□□ 0.24
APOEP02649 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.57■□□□□ 0.24
APOEP02649 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOEP02649 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
APOEP02649 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.57■□□□□ 0.24
APOEP02649 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms