Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE3O75131 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.24■□□□□ 0.03
CPNE3O75131 AC055876.2-201ENST00000531834 546 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CPNE3O75131 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.24■□□□□ 0.03
CPNE3O75131 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE3O75131 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE3O75131 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CPNE3O75131 AL109936.8-201ENST00000641772 604 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CPNE3O75131 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 AC144831.1-201ENST00000573312 2656 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CPNE3O75131 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CPNE3O75131 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE3O75131 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 AL136982.4-201ENST00000437689 1740 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 AL592424.1-201ENST00000563624 1536 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 AC098614.1-201ENST00000368528 745 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE3O75131 MEP1AP4-201ENST00000423244 1087 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE3O75131 SPDYE18-201ENST00000510091 1050 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE3O75131 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 SRD5A3P1-201ENST00000603021 949 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 AC074044.1-201ENST00000609673 707 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 AC004461.2-201ENST00000629517 803 ntBASIC15.23■□□□□ 0.03
CPNE3O75131 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CPNE3O75131 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE3O75131 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE3O75131 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE3O75131 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CPNE3O75131 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.22■□□□□ 0.03
CPNE3O75131 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.22■□□□□ 0.03
CPNE3O75131 TPRX2P-201ENST00000535362 881 ntBASIC15.22■□□□□ 0.03
CPNE3O75131 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CPNE3O75131 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms