Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ACTN4O43707 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
ACTN4O43707 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.71■□□□□ 0.42
ACTN4O43707 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 MST1L-201ENST00000442552 2185 ntBASIC17.7■□□□□ 0.42
ACTN4O43707 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.7■□□□□ 0.42
ACTN4O43707 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 FO393414.2-201ENST00000405153 598 ntBASIC17.7■□□□□ 0.42
ACTN4O43707 AC023141.5-201ENST00000458585 616 ntBASIC17.7■□□□□ 0.42
ACTN4O43707 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.7■□□□□ 0.42
ACTN4O43707 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.7■□□□□ 0.42
ACTN4O43707 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ACTN4O43707 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.7■□□□□ 0.42
ACTN4O43707 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ACTN4O43707 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACTN4O43707 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.7■□□□□ 0.42
ACTN4O43707 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 KRT8P12-202ENST00000472924 1397 ntBASIC17.69■□□□□ 0.42
ACTN4O43707 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.69■□□□□ 0.42
ACTN4O43707 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.69■□□□□ 0.42
ACTN4O43707 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ACTN4O43707 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 MIR3687-2-201ENST00000577708 61 ntBASIC17.69■□□□□ 0.42
ACTN4O43707 MIR4453-201ENST00000584019 89 ntBASIC17.69■□□□□ 0.42
ACTN4O43707 MIR3687-1-201ENST00000614492 61 ntBASIC17.69■□□□□ 0.42
ACTN4O43707 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ACTN4O43707 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ACTN4O43707 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ACTN4O43707 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 AC023024.2-201ENST00000623561 1993 ntBASIC17.68■□□□□ 0.42
ACTN4O43707 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms