Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LDB2O43679 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LDB2O43679 MIR770-201ENST00000390219 98 ntBASIC15.77■□□□□ 0.12
LDB2O43679 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.77■□□□□ 0.12
LDB2O43679 RPL13P2-201ENST00000440687 659 ntBASIC15.77■□□□□ 0.12
LDB2O43679 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.77■□□□□ 0.12
LDB2O43679 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.77■□□□□ 0.12
LDB2O43679 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.77■□□□□ 0.12
LDB2O43679 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.77■□□□□ 0.12
LDB2O43679 ZNF890P-202ENST00000530367 1156 ntBASIC15.77■□□□□ 0.12
LDB2O43679 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 AC093512.1-201ENST00000617969 520 ntBASIC15.77■□□□□ 0.12
LDB2O43679 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.77■□□□□ 0.12
LDB2O43679 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LDB2O43679 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDB2O43679 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.77■□□□□ 0.11
LDB2O43679 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.77■□□□□ 0.11
LDB2O43679 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.77■□□□□ 0.11
LDB2O43679 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDB2O43679 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LDB2O43679 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LDB2O43679 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 C18orf15-201ENST00000623680 2534 ntBASIC15.76■□□□□ 0.11
LDB2O43679 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LDB2O43679 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 AC144831.1-201ENST00000573312 2656 ntBASIC15.76■□□□□ 0.11
LDB2O43679 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LDB2O43679 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.76■□□□□ 0.11
LDB2O43679 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.76■□□□□ 0.11
LDB2O43679 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.76■□□□□ 0.11
LDB2O43679 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.76■□□□□ 0.11
LDB2O43679 LINC01115-203ENST00000606068 577 ntBASIC15.76■□□□□ 0.11
LDB2O43679 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
LDB2O43679 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 AF228730.6-201ENST00000641497 218 ntBASIC15.76■□□□□ 0.11
LDB2O43679 AC084121.3-201ENST00000641716 218 ntBASIC15.76■□□□□ 0.11
LDB2O43679 AL109936.8-201ENST00000641772 604 ntBASIC15.76■□□□□ 0.11
LDB2O43679 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.76■□□□□ 0.11
LDB2O43679 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.76■□□□□ 0.11
LDB2O43679 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LDB2O43679 AL109954.1-202ENST00000564051 2148 ntBASIC15.76■□□□□ 0.11
LDB2O43679 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDB2O43679 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
LDB2O43679 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.76■□□□□ 0.11
LDB2O43679 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LDB2O43679 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
LDB2O43679 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms