Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.07□□□□□ -0.16
SGCEO43556 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SGCEO43556 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
SGCEO43556 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SGCEO43556 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 AL691432.1-201ENST00000596308 1422 ntBASIC14.07□□□□□ -0.16
SGCEO43556 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SGCEO43556 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SGCEO43556 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.06□□□□□ -0.16
SGCEO43556 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.06□□□□□ -0.16
SGCEO43556 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SGCEO43556 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SGCEO43556 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 FAM45BP-202ENST00000592932 1624 ntBASIC14.05□□□□□ -0.16
SGCEO43556 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.05□□□□□ -0.16
SGCEO43556 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SGCEO43556 KRT18P13-201ENST00000400056 1290 ntBASIC14.05□□□□□ -0.16
SGCEO43556 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.05□□□□□ -0.16
SGCEO43556 RPS8P6-201ENST00000426177 609 ntBASIC14.05□□□□□ -0.16
SGCEO43556 FAM58DP-201ENST00000428076 619 ntBASIC14.05□□□□□ -0.16
SGCEO43556 AL353705.2-201ENST00000428243 662 ntBASIC14.05□□□□□ -0.16
SGCEO43556 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SGCEO43556 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms