Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFS4O43181 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFS4O43181 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFS4O43181 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC004890.2-204ENST00000481968 304 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 RNA5SP421-201ENST00000516864 134 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
NDUFS4O43181 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFS4O43181 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFS4O43181 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC025048.3-201ENST00000590609 569 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.13■□□□□ 0.01
NDUFS4O43181 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC097359.3-201ENST00000603982 1210 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 AC005702.4-201ENST00000618393 416 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 AL607033.1-201ENST00000623900 1599 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 AL109936.8-201ENST00000641772 604 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFS4O43181 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 AC092127.1-201ENST00000567093 3455 ntBASIC15.13■□□□□ 0.01
NDUFS4O43181 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFS4O43181 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFS4O43181 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFS4O43181 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFS4O43181 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.12■□□□□ 0.01
NDUFS4O43181 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 AL139384.1-201ENST00000612143 3047 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 AC022144.1-201ENST00000602255 1580 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.12■□□□□ 0.01
NDUFS4O43181 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.12■□□□□ 0.01
NDUFS4O43181 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 TARDBPP1-201ENST00000442013 1203 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 AC009477.1-201ENST00000452936 217 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 INGX-202ENST00000489074 768 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.12■□□□□ 0.01
NDUFS4O43181 SDHAP3-202ENST00000515467 728 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.12■□□□□ 0.01
NDUFS4O43181 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.12■□□□□ 0.01
NDUFS4O43181 AC044860.1-202ENST00000559481 777 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.12■□□□□ 0.01
NDUFS4O43181 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 AL355385.1-201ENST00000606123 409 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NDUFS4O43181 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
NDUFS4O43181 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 AL162727.3-201ENST00000635661 2787 ntBASIC15.12■□□□□ 0.01
NDUFS4O43181 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFS4O43181 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.12■□□□□ 0.01
NDUFS4O43181 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFS4O43181 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms