Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK2O00526 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 HNRNPUP1-201ENST00000554987 333 ntBASIC12.7□□□□□ -0.38
UPK2O00526 RARRES2P9-201ENST00000565168 469 ntBASIC12.7□□□□□ -0.38
UPK2O00526 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
UPK2O00526 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.7□□□□□ -0.38
UPK2O00526 AC097359.3-201ENST00000603982 1210 ntBASIC12.7□□□□□ -0.38
UPK2O00526 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 AL161772.1-201ENST00000610494 4412 ntBASIC12.7□□□□□ -0.38
UPK2O00526 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK2O00526 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK2O00526 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UPK2O00526 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK2O00526 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK2O00526 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK2O00526 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK2O00526 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UPK2O00526 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 TCAF2P1-201ENST00000291129 2421 ntBASIC12.69□□□□□ -0.38
UPK2O00526 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.69□□□□□ -0.38
UPK2O00526 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
UPK2O00526 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.69□□□□□ -0.38
UPK2O00526 KRT18P58-201ENST00000527480 1120 ntBASIC12.69□□□□□ -0.38
UPK2O00526 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.69□□□□□ -0.38
UPK2O00526 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 MTDHP5-201ENST00000598980 586 ntBASIC12.69□□□□□ -0.38
UPK2O00526 AC055717.3-201ENST00000622967 595 ntBASIC12.69□□□□□ -0.38
UPK2O00526 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK2O00526 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK2O00526 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
UPK2O00526 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UPK2O00526 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK2O00526 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UPK2O00526 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK2O00526 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK2O00526 AC026396.1-201ENST00000419388 421 ntBASIC12.68□□□□□ -0.38
UPK2O00526 HTR5BP-201ENST00000430851 1154 ntBASIC12.68□□□□□ -0.38
UPK2O00526 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK2O00526 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK2O00526 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms