Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AGGF1P2-201ENST00000426656 2106 ntBASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ZNF890P-202ENST00000530367 1156 ntBASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AC009118.2-201ENST00000613275 655 ntBASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AC092171.3-201ENST00000610122 2651 ntBASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 SERBP1P5-201ENST00000510079 1181 ntBASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AC008738.7-201ENST00000609744 511 ntBASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.65□□□□□ -0.7
LRCOL1A6NCL2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms