Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC190387.1-201ENST00000551683 408 ntBASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL035456.1-201ENST00000456064 1369 ntBASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FAM220BP-201ENST00000377689 816 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HAUS4P1-201ENST00000406739 1145 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC092580.3-201ENST00000430932 139 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC002472.2-201ENST00000442739 958 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL136379.1-201ENST00000623471 2642 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC006058.4-201ENST00000624016 1670 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PPT1-215ENST00000641471 2368 ntBASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.75□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms