Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AC010327.5-201ENST00000586923 3061 ntBASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 MTHFR-210ENST00000641407 2387 ntBASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC113367.3-201ENST00000508316 1912 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PRYP6-201ENST00000514804 343 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 OR7E14P-202ENST00000530490 1290 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC061975.2-201ENST00000581722 295 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AL356488.2-201ENST00000602755 427 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AL450472.2-201ENST00000603663 1156 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AC097359.2-201ENST00000604992 2389 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 MIR1199-201ENST00000621445 119 ntBASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRBV3S1A0A5B6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 RPL5P21-201ENST00000404620 815 ntBASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 RPS2P1-201ENST00000434010 821 ntBASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms