Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 BNIP3P1-202ENST00000550043 1585 ntBASIC13.06□□□□□ -0.32
A0A1W2PRF3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
A0A1W2PRF3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
A0A1W2PRF3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 KRT8P12-202ENST00000472924 1397 ntBASIC13.06□□□□□ -0.32
A0A1W2PRF3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
A0A1W2PRF3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 TERF1P3-201ENST00000505638 1227 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC243562.2-201ENST00000561247 970 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC009407.1-201ENST00000568958 598 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC004233.3-201ENST00000607794 1269 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 PAUPAR-201ENST00000630360 2965 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AL033527.5-202ENST00000641632 1098 ntBASIC13.05□□□□□ -0.32
A0A1W2PRF3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.05□□□□□ -0.32
A0A1W2PRF3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
A0A1W2PRF3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.04□□□□□ -0.32
A0A1W2PRF3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
A0A1W2PRF3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms