Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 KRT43P-201ENST00000434019 910 ntBASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 KRT223P-202ENST00000449164 1292 ntBASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 AC092658.1-201ENST00000505836 891 ntBASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 MIR4321-201ENST00000592276 80 ntBASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 TMEM14DP-201ENST00000422205 345 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC092552.1-201ENST00000547243 906 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC008735.3-201ENST00000596646 500 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 U82695.1-201ENST00000635752 1889 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 ME2P1-201ENST00000426028 1970 ntBASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGA9Q9Y5G4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms