Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MIR3180-1-201ENST00000580374 94 ntBASIC13□□□□□ -0.33
RCL1Q9Y2P8 MIR3180-3-201ENST00000584616 94 ntBASIC13□□□□□ -0.33
RCL1Q9Y2P8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13□□□□□ -0.33
RCL1Q9Y2P8 AL365330.1-201ENST00000607459 531 ntBASIC13□□□□□ -0.33
RCL1Q9Y2P8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RCL1Q9Y2P8 AC126335.2-201ENST00000623362 4637 ntBASIC13□□□□□ -0.33
RCL1Q9Y2P8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RCL1Q9Y2P8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 RNU1-129P-201ENST00000384064 167 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 FAM86EP-206ENST00000510506 987 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 U1.21-201ENST00000580816 167 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC069148.1-201ENST00000608741 768 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC091076.1-201ENST00000610741 619 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC116407.4-201ENST00000623319 1061 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 AC023024.2-201ENST00000623561 1993 ntBASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms