Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC098614.1-201ENST00000368528 745 ntBASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 SPDYE18-201ENST00000510091 1050 ntBASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 SDHAP3-202ENST00000515467 728 ntBASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC008494.3-201ENST00000606615 944 ntBASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AC024909.3-201ENST00000611513 2257 ntBASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA1Q9UND3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AL391825.1-201ENST00000457671 1364 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SPDYE17-201ENST00000412399 783 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms