Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH9Q9ULB4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH9Q9ULB4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH9Q9ULB4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH9Q9ULB4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH9Q9ULB4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AL365203.3-201ENST00000609742 2057 ntBASIC16.63■□□□□ 0.25
CDH9Q9ULB4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC239800.4-201ENST00000603712 296 ntBASIC16.63■□□□□ 0.25
CDH9Q9ULB4 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.63■□□□□ 0.25
CDH9Q9ULB4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CDH9Q9ULB4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AP005117.1-202ENST00000581724 1908 ntBASIC16.62■□□□□ 0.25
CDH9Q9ULB4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 LINC02199-201ENST00000506655 2702 ntBASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 KRT17P7-201ENST00000451704 1104 ntBASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AL049840.4-201ENST00000602422 811 ntBASIC16.62■□□□□ 0.25
CDH9Q9ULB4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH9Q9ULB4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms