Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PIF1Q9H611 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PIF1Q9H611 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
PIF1Q9H611 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.2■□□□□ 0.02
PIF1Q9H611 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.2■□□□□ 0.02
PIF1Q9H611 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
PIF1Q9H611 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PIF1Q9H611 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 AC026396.1-201ENST00000419388 421 ntBASIC15.19■□□□□ 0.02
PIF1Q9H611 PRSS29P-201ENST00000440800 595 ntBASIC15.19■□□□□ 0.02
PIF1Q9H611 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 KRT18P34-201ENST00000488218 1270 ntBASIC15.19■□□□□ 0.02
PIF1Q9H611 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.19■□□□□ 0.02
PIF1Q9H611 MIR3909-201ENST00000579518 119 ntBASIC15.19■□□□□ 0.02
PIF1Q9H611 MIR7706-201ENST00000613747 67 ntBASIC15.19■□□□□ 0.02
PIF1Q9H611 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PIF1Q9H611 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.19■□□□□ 0.02
PIF1Q9H611 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIF1Q9H611 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
PIF1Q9H611 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.18■□□□□ 0.02
PIF1Q9H611 AC108751.1-201ENST00000490852 363 ntBASIC15.18■□□□□ 0.02
PIF1Q9H611 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PIF1Q9H611 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.18■□□□□ 0.02
PIF1Q9H611 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 AL365330.1-201ENST00000607459 531 ntBASIC15.18■□□□□ 0.02
PIF1Q9H611 AC116407.3-201ENST00000623905 1129 ntBASIC15.18■□□□□ 0.02
PIF1Q9H611 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.18■□□□□ 0.02
PIF1Q9H611 AC073439.1-201ENST00000624121 1774 ntBASIC15.18■□□□□ 0.02
PIF1Q9H611 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PIF1Q9H611 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIF1Q9H611 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.17■□□□□ 0.02
PIF1Q9H611 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms