Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AC105021.1-202ENST00000570572 669 ntBASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 MIR4745-201ENST00000577608 62 ntBASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AL589739.1-201ENST00000607720 493 ntBASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 SPDYE12P-201ENST00000618416 771 ntBASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AJ011932.1-201ENST00000621707 465 ntBASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 CETN4P-206ENST00000642099 2168 ntBASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC241585.1-201ENST00000433527 519 ntBASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 RN7SL828P-201ENST00000607615 303 ntBASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCGF1Q9BSM1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms