Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TMEM14DP-201ENST00000422205 345 ntBASIC18.36■□□□□ 0.53
SLF1Q9BQI6 KRT18P64-201ENST00000434946 1219 ntBASIC18.36■□□□□ 0.53
SLF1Q9BQI6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 ACA64.2-201ENST00000459014 129 ntBASIC18.36■□□□□ 0.53
SLF1Q9BQI6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.36■□□□□ 0.53
SLF1Q9BQI6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TOMM22P5-201ENST00000416399 439 ntBASIC18.35■□□□□ 0.53
SLF1Q9BQI6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 AC017083.2-201ENST00000608069 979 ntBASIC18.35■□□□□ 0.53
SLF1Q9BQI6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 AL596257.1-201ENST00000641463 2694 ntBASIC18.35■□□□□ 0.53
SLF1Q9BQI6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLF1Q9BQI6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AC136604.1-201ENST00000418535 575 ntBASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 SLED1-202ENST00000512051 380 ntBASIC18.34■□□□□ 0.53
SLF1Q9BQI6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 HNRNPUP1-201ENST00000554987 333 ntBASIC18.34■□□□□ 0.53
SLF1Q9BQI6 RAB43P1-201ENST00000561790 589 ntBASIC18.34■□□□□ 0.53
SLF1Q9BQI6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLF1Q9BQI6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms