Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UPF3AP3-201ENST00000420996 769 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 GPS2P2-201ENST00000430745 888 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 SPDYE14P-201ENST00000442619 822 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 AC010327.4-202ENST00000591484 748 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 AC112693.3-201ENST00000624819 1983 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 RPSAP43-201ENST00000402237 625 ntBASIC16.73■□□□□ 0.27
TRIM11Q96F44 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AP000347.1-202ENST00000435868 847 ntBASIC16.73■□□□□ 0.27
TRIM11Q96F44 AC023141.5-201ENST00000458585 616 ntBASIC16.73■□□□□ 0.27
TRIM11Q96F44 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AC026150.2-201ENST00000564693 1156 ntBASIC16.73■□□□□ 0.27
TRIM11Q96F44 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AC103702.1-201ENST00000548801 2630 ntBASIC16.73■□□□□ 0.27
TRIM11Q96F44 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM11Q96F44 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
TRIM11Q96F44 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 LINC00554-201ENST00000564841 3011 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 C18orf15-201ENST00000623680 2534 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC126365.1-201ENST00000578585 1514 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC144831.1-201ENST00000573312 2656 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 SPDYE7P-202ENST00000420373 878 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 AC112482.1-201ENST00000492080 688 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 RN7SL828P-201ENST00000607615 303 ntBASIC16.72■□□□□ 0.27
TRIM11Q96F44 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM11Q96F44 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM11Q96F44 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms