Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 AC011477.6-201ENST00000604980 1927 ntBASIC17.1■□□□□ 0.33
PGBD4Q96DM1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 KRT43P-201ENST00000434019 910 ntBASIC17.1■□□□□ 0.33
PGBD4Q96DM1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.1■□□□□ 0.33
PGBD4Q96DM1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 MIR658-201ENST00000385210 100 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 BOLA2P3-201ENST00000404566 256 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 SOCS2P1-201ENST00000417727 557 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AL359711.2-201ENST00000563105 872 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 BTNL10-201ENST00000595971 695 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 AL512343.1-201ENST00000605837 169 ntBASIC17.09■□□□□ 0.33
PGBD4Q96DM1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PGBD4Q96DM1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PGBD4Q96DM1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD4Q96DM1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PGBD4Q96DM1 LINC02199-201ENST00000506655 2702 ntBASIC17.08■□□□□ 0.33
PGBD4Q96DM1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD4Q96DM1 INTS4P2-202ENST00000614726 2019 ntBASIC17.08■□□□□ 0.33
PGBD4Q96DM1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PGBD4Q96DM1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 MIR1909-201ENST00000411312 80 ntBASIC17.08■□□□□ 0.32
PGBD4Q96DM1 ACTG1P3-201ENST00000431775 1114 ntBASIC17.08■□□□□ 0.32
PGBD4Q96DM1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 AC022210.1-201ENST00000449856 793 ntBASIC17.08■□□□□ 0.32
PGBD4Q96DM1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 KRT18P43-201ENST00000469825 1281 ntBASIC17.08■□□□□ 0.32
PGBD4Q96DM1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms