Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TOMM22P5-201ENST00000416399 439 ntBASIC13.89□□□□□ -0.19
TMEM54Q969K7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC114501.2-201ENST00000439631 535 ntBASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC009407.1-201ENST00000568958 598 ntBASIC13.89□□□□□ -0.19
TMEM54Q969K7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC073347.1-201ENST00000421633 2643 ntBASIC13.89□□□□□ -0.19
TMEM54Q969K7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 AC112693.3-201ENST00000624819 1983 ntBASIC13.89□□□□□ -0.19
TMEM54Q969K7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM54Q969K7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM54Q969K7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC013268.4-201ENST00000637413 2228 ntBASIC13.88□□□□□ -0.19
TMEM54Q969K7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC004890.2-204ENST00000481968 304 ntBASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 AC015910.1-201ENST00000579400 975 ntBASIC13.88□□□□□ -0.19
TMEM54Q969K7 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.88□□□□□ -0.19
TMEM54Q969K7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 NFIC-211ENST00000641145 8399 ntBASIC13.88□□□□□ -0.19
TMEM54Q969K7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM54Q969K7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM54Q969K7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.87□□□□□ -0.19
TMEM54Q969K7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms