Protein–RNA interactions for Protein: Q92542

NCSTN, Nicastrin, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTNQ92542 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.76■□□□□ 0.11
NCSTNQ92542 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 FAM207CP-201ENST00000443486 507 ntBASIC15.76■□□□□ 0.11
NCSTNQ92542 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.76■□□□□ 0.11
NCSTNQ92542 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.76■□□□□ 0.11
NCSTNQ92542 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.76■□□□□ 0.11
NCSTNQ92542 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 AC008761.3-201ENST00000624803 892 ntBASIC15.76■□□□□ 0.11
NCSTNQ92542 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCSTNQ92542 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.76■□□□□ 0.11
NCSTNQ92542 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
NCSTNQ92542 PCGF3-213ENST00000620529 1899 ntBASIC15.76■□□□□ 0.11
NCSTNQ92542 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.75■□□□□ 0.11
NCSTNQ92542 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NCSTNQ92542 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.75■□□□□ 0.11
NCSTNQ92542 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NCSTNQ92542 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 AC190387.1-201ENST00000551683 408 ntBASIC15.75■□□□□ 0.11
NCSTNQ92542 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NCSTNQ92542 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NCSTNQ92542 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCSTNQ92542 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
NCSTNQ92542 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms