Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHC3Q92529 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC3Q92529 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.82■□□□□ 0.28
SHC3Q92529 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.82■□□□□ 0.28
SHC3Q92529 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC3Q92529 KRT18P64-201ENST00000434946 1219 ntBASIC16.82■□□□□ 0.28
SHC3Q92529 METTL21AP1-201ENST00000438852 635 ntBASIC16.82■□□□□ 0.28
SHC3Q92529 FAM86GP-201ENST00000448322 971 ntBASIC16.82■□□□□ 0.28
SHC3Q92529 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 AC097493.3-201ENST00000509725 367 ntBASIC16.82■□□□□ 0.28
SHC3Q92529 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.82■□□□□ 0.28
SHC3Q92529 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC3Q92529 AL844908.2-201ENST00000609461 460 ntBASIC16.82■□□□□ 0.28
SHC3Q92529 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHC3Q92529 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC3Q92529 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC3Q92529 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC3Q92529 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC3Q92529 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC3Q92529 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.82■□□□□ 0.28
SHC3Q92529 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC3Q92529 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SHC3Q92529 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHC3Q92529 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 AC087499.5-201ENST00000452760 1342 ntBASIC16.81■□□□□ 0.28
SHC3Q92529 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC3Q92529 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.81■□□□□ 0.28
SHC3Q92529 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.81■□□□□ 0.28
SHC3Q92529 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 AC027369.6-201ENST00000525520 931 ntBASIC16.81■□□□□ 0.28
SHC3Q92529 ZNF890P-202ENST00000530367 1156 ntBASIC16.81■□□□□ 0.28
SHC3Q92529 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.81■□□□□ 0.28
SHC3Q92529 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.81■□□□□ 0.28
SHC3Q92529 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC3Q92529 AC074044.1-201ENST00000609673 707 ntBASIC16.81■□□□□ 0.28
SHC3Q92529 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC3Q92529 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC3Q92529 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC3Q92529 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC3Q92529 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 AL596257.1-201ENST00000641463 2694 ntBASIC16.81■□□□□ 0.28
SHC3Q92529 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SHC3Q92529 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHC3Q92529 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC3Q92529 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SHC3Q92529 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC3Q92529 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC3Q92529 TREML5P-201ENST00000421694 576 ntBASIC16.8■□□□□ 0.28
SHC3Q92529 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC3Q92529 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SHC3Q92529 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms