Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AL390755.1-201ENST00000623716 2027 ntBASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AGAP7P-201ENST00000582299 2062 ntBASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AGAP14-201ENST00000624701 2060 ntBASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AC092127.1-201ENST00000567093 3455 ntBASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB3IL1Q8TBN0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 AC005089.1-201ENST00000619486 2241 ntBASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB3IL1Q8TBN0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RAB3IL1Q8TBN0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 OR7E47P-204ENST00000575924 449 ntBASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AL121772.3-201ENST00000610840 674 ntBASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 REXO1L6P-202ENST00000619970 1078 ntBASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
RAB3IL1Q8TBN0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms