Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 MST1L-201ENST00000442552 2185 ntBASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 AL136379.1-201ENST00000623471 2642 ntBASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHKBP1Q8TBC3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 KRT18P64-201ENST00000434946 1219 ntBASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 MIR4259-201ENST00000584466 101 ntBASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHKBP1Q8TBC3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AC119751.2-201ENST00000504529 210 ntBASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AC015936.2-201ENST00000593177 259 ntBASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
SHKBP1Q8TBC3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms