Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 AL162274.1-201ENST00000617191 1098 ntBASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC60Q8IWA6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 C1QBPP1-201ENST00000400117 770 ntBASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 GPR53P-205ENST00000457298 1084 ntBASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 USP32P1-208ENST00000506594 1164 ntBASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 DRD5P1-201ENST00000456605 1438 ntBASIC17.46■□□□□ 0.39
CCDC60Q8IWA6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
CCDC60Q8IWA6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 SOCS2P1-201ENST00000417727 557 ntBASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 AC244107.1-201ENST00000442033 332 ntBASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 KRT17P8-201ENST00000540749 863 ntBASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 AC106886.1-201ENST00000568660 600 ntBASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 MIR5189-201ENST00000577370 114 ntBASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC60Q8IWA6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC60Q8IWA6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms